Logon as user with administrator privileges then:
wmic process where "name like '%<application name>%'" delete
E.g. To kill all VNC server processes
$ wmic process where "name like 'vncserv%'" delete
Deleting instance \\IDEA-PC\ROOT\CIMV2:Win32_Process.Handle="1976"
Instance deletion successful.
Deleting instance \\IDEA-PC\ROOT\CIMV2:Win32_Process.Handle="1088"
Instance deletion successful.
Deleting instance \\IDEA-PC\ROOT\CIMV2:Win32_Process.Handle="3212"
Instance deletion successful.
Or you can use SSH to kill processes remotely on a windows box from *nix box:
ssh <user>@<ip address> $(echo wmic process where \"name like \'%<process to kill>%\'\" delete)
or
ssh <user>@<ip address> taskkill /f /im <process to kill> /t
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